Elastix controller

class library.controller.elastix_controller.ElastixController

Bases: object

Controller class for the elastix table

Args:

Controller (Class): Parent class of sqalchemy session

add_elastix_row(animal, section, rotation, xshift, yshift, iteration=0)

adding a row in the elastix table

Parameters:

• animal – (str) Animal ID

• section – (str) Section Number

• rotation – float

• xshift – float

• yshift – float

Iteration (int):

Iteration, which pass are we working on.

check_elastix_metric_row(animal, section, iteration=0)

checks that a given elastix row exists in the database

Parameters:

• (str) (animal) – Animal ID

• (int) (section) – Section Number

Iteration (int):

Iteration, which pass are we working on.

Return bool:

if the row in question exists

check_elastix_row(animal, section, iteration=0)

checks that a given elastix row exists in the database

Parameters:

animal – (str): Animal ID

Section (int):

Section Number

Iteration (int):

Iteration, which pass are we working on.

Return boolean:

if the row in question exists

get_elastix_row(animal, section, iteration=0)

gets a given elastix row exists in the database

Parameters:

animal – (str): Animal ID

Section (int):

Section Number

Iteration (int):

Iteration, which pass are we working on.

Return boolean:

if the row in question exists

update_elastix_row(animal, section, iteration, updates)

Update a row

Parameters:

• animal – (str) Animal ID

• section – (str) Section Number

• updates – dictionary of column:values to update